| Element | Missed Instructions | Cov. | Missed Branches | Cov. | Missed | Cxty | Missed | Lines | Missed | Methods |
| Total | 168 of 168 | 0% | 18 of 18 | 0% | 23 | 23 | 45 | 45 | 14 | 14 |
| setRange(int, int, boolean, boolean) | 0% | 0% | 6 | 6 | 13 | 13 | 1 | 1 | ||
| AlignMatch(Range, Range, boolean, int, int) | 0% | n/a | 1 | 1 | 13 | 13 | 1 | 1 | ||
| copy(AlignMatch) | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| isSelfMatch() | 0% | 0% | 3 | 3 | 4 | 4 | 1 | 1 | ||
| getQuerySequenceStart() | 0% | 0% | 2 | 2 | 3 | 3 | 1 | 1 | ||
| getQuerySequenceEnd() | 0% | 0% | 2 | 2 | 3 | 3 | 1 | 1 | ||
| getSubjectSequenceStart() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getSubjectSequenceEnd() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getLength() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getSubjectSequenceRange() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getQuerySequenceRange() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| isRevMatch() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getScore() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 | ||
| getPercentID() | 0% | n/a | 1 | 1 | 1 | 1 | 1 | 1 |