| writeComboBases() |  | 0% |  | 0% | 8 | 8 | 82 | 82 | 1 | 1 |
| writeCodonUsage() |  | 0% |  | 0% | 11 | 11 | 40 | 40 | 1 | 1 |
| writeBases(String, String, String, int) |  | 0% |  | 0% | 11 | 11 | 27 | 27 | 1 | 1 |
| writeFeatureBases(int) |  | 0% |  | 0% | 5 | 5 | 31 | 31 | 1 | 1 |
| getWriteFile(String, String, JTextField) |  | 0% |  | 0% | 9 | 9 | 29 | 29 | 1 | 1 |
| writeAllSequence(int) |  | 0% |  | 0% | 8 | 8 | 16 | 16 | 1 | 1 |
| writePIRDataBase() |  | 0% |  | 0% | 4 | 4 | 18 | 18 | 1 | 1 |
| writeAminoAcids() |  | 0% |  | 0% | 4 | 4 | 18 | 18 | 1 | 1 |
| getStreamSequence(String, String, int) |  | 0% |  | 0% | 4 | 4 | 5 | 5 | 1 | 1 |
| writeBasesOfSelection(int) |  | 0% |  | 0% | 2 | 2 | 7 | 7 | 1 | 1 |
| writeUpstreamBases(int) |  | 0% |  | 0% | 2 | 2 | 6 | 6 | 1 | 1 |
| writeDownstreamBases(int) |  | 0% |  | 0% | 2 | 2 | 6 | 6 | 1 | 1 |
| getSequenceFileName(int) |  | 0% |  | 0% | 4 | 4 | 5 | 5 | 1 | 1 |
| WriteMenu(JFrame, Selection, EntryGroup, String) |  | 100% | | n/a | 0 | 1 | 0 | 78 | 0 | 1 |
| WriteMenu(JFrame, Selection, EntryGroup) |  | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |